BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038F05SP1|AL430574
(653 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1140 1083 0.0
3x_Contig170 917 0.0
>3x_Contig1140
Length = 5352
Score = 1083 bits (543), Expect = 0.0
Identities = 626/654 (95%), Gaps = 3/654 (0%)
Strand = Plus / Plus
Query: 1 aaagatgattcccctgtagcaccgcctttgaacatcgacgctttattaaagaatgtacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2887 aaagatgattcccctgtagcaccgcctttgaacatcgacgctttattaaagaatgtacac 2946
Query: 61 tcattggaactgaattatcaagggtttcaacctagcgagaagaaagctctattgaggact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2947 tcattggaactgaattatcaagggtttcaacctagcgagaagaaagctctattgaggact 3006
Query: 121 atatctgccctttgcaaagaggttatcgaaaatgcgatgtgccacggattagacggatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3007 atatctgccctttgcaaagaggttatcgaaaatgcgatgtgccacggattagacggatgc 3066
Query: 181 attaaactagaagacctaaacctgctgtttaggttttatgttgacttagagaaggagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3067 attaaactagaagacctaaacctgctgtttaggttttatgttgacttagagaaggagttc 3126
Query: 241 aaactggactttaacaaagawataaagaagaagattttagaaggtttagcaaaawwtgag 300
|||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||
Sbjct: 3127 aaactggactttaacaaagatataaagaagatgattttagaaggtttagctaaatttgag 3186
Query: 301 aacgactttgttttaaataccaatgagaaagtgaaaaawgtcgcattaaagagactatgt 360
|||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 3187 aacgactttgttttaaattccaatgagaaagtgataaatgtcgcattaaagagactatgt 3246
Query: 361 gccatttgggcacgattctattctcgggtatatcccgactgtatgaattgtcttaaacag 420
||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||
Sbjct: 3247 gccatttgggcacgattctattctcgggtatatcctgactgtatgatttgtcttatacag 3306
Query: 421 amccctgcagaaatcgaacagctctttgttaatangcttccgtgangcnattgtc-tgcc 479
| ||||||||| |||||||||||| ||||||||| |||||||||| || |||||| ||||
Sbjct: 3307 atccctgcagatatcgaacagctc-ttgttaatatgcttccgtgatgctattgtcttgcc 3365
Query: 480 gtaccaaaagaacttcaagaatgcggatgaaggaatatcgatgagtttttctaagtatat 539
|||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3366 gtactataagaacttcatgaatgcggatgaaggaatatcgatgagtttttctaagtatat 3425
Query: 540 acagaacgaagaggaaaacggcgtgaaacaacagcacaaacttatatcaataacaaagtt 599
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct: 3426 acagaacgaagaggaaaacggcgtgaaacaacagcacaaacttatattaat-tcaatgtt 3484
Query: 600 tcggtgtactcagctcgaaaaaaggtaaagacatgawtcaaaggttgtttgaag 653
|||||||||||||||||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 3485 tcggtgtactcagctcgataaaaggtaaagacatgaatcaaaggttgattgaag 3538
>3x_Contig170
Length = 1168
Score = 917 bits (460), Expect = 0.0
Identities = 607/655 (92%), Gaps = 4/655 (0%)
Strand = Plus / Minus
Query: 1 aaagatgattcccctgtagcaccgcctttgaacatcgacgctttattaaagaatgtacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 aaagatgattcccctgtagcaccgcctttgaacatcgacgctttattaaagaatgtacac 769
Query: 61 tcattggaactgaattatcaagggtttcaacctagcgagaagaaagctctattgaggact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tcattggaactgaattatcaagggtttcaacctagcgagaagaaagctctattgaggact 709
Query: 121 atatctgccctttgcaaagagg-ttatcgaaaatgcgatgtgccacggattagacggatg 179
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 708 atatctgccctttgcaaagagggttatcgaaaatgcgatgtgccacggattagacggatg 649
Query: 180 cattaaactagaagacctaaacctgctgtttaggttttatgttgacttagagaaggagtt 239
|||||||||| || |||||||||| || |||| |||||| || ||||| | || | ||
Sbjct: 648 cattaaactacaacacctaaacctcctctttaccttttatcttcacttacacaaccactt 589
Query: 240 caaactggactttaacaaagawataaagaagaagattttagaaggtttagcaaaawwtga 299
||||||| ||||||||||| | ||||| || | ||||||||||||||| | ||| |||
Sbjct: 588 caaactgcactttaacaaacatataaacaacatcattttagaaggtttacctaaatttga 529
Query: 300 gaacgactttgttttaaataccaatgagaaagtgaaaaawgtcgcattaaagagactatg 359
||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 528 gaacgactttgttttaaattccaatgagaaagtgataaatgtcgcattaaagagactatg 469
Query: 360 tgccatttgggcacgattctattctcgggtatatcccgactgtatgaattgtcttaaaca 419
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||
Sbjct: 468 tgccatttgggcacgattctattctcgggtatatcctgactgtatgatttgtcttataca 409
Query: 420 gamccctgcagaaatcgaacagctctttgttaatangcttccgtgangcnattgtc-tgc 478
|| ||||||||| |||||||||||| ||||||||| |||||||||| || |||||| |||
Sbjct: 408 gatccctgcagatatcgaacagctc-ttgttaatatgcttccgtgatgctattgtcttgc 350
Query: 479 cgtaccaaaagaacttcaagaatgcggatgaaggaatatcgatgagtttttctaagtata 538
||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cgtactataagaacttcatgaatgcggatgaaggaatatcgatgagtttttctaagtata 290
Query: 539 tacagaacgaagaggaaaacggcgtgaaacaacagcacaaacttatatcaataacaaagt 598
|||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct: 289 tacagaacgaagaggaaaacggcgtgaaacaacagcacaaacttatattaat-tcaatgt 231
Query: 599 ttcggtgtactcagctcgaaaaaaggtaaagacatgawtcaaaggttgtttgaag 653
||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||
Sbjct: 230 ttcggtgtactcagctcgataaaaggtaaagacatgaatcaaaggttgattgaag 176
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4395
Number of Sequences: 1807
Number of extensions: 4395
Number of successful extensions: 102
Number of sequences better than 1.0e-20: 2
length of query: 653
length of database: 10,358,551
effective HSP length: 16
effective length of query: 637
effective length of database: 10,329,639
effective search space: 6579980043
effective search space used: 6579980043
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)